Cobra..should I re intialize my vox? Maybe my tuner will reset too.
It is definitely worth a try to reset the tuner; it can't hurt to eliminate that variable. But even if it is offset, you should be able to get the guitar to tune Open and the 12th fret as long as the bridge point is in the right position. Remember, the nut and the frets are fixed position items. Only the bridge contact postion can vary, so that's the adjustment point.
Just a HINT: On my PRS SE Custom, there are 12.5 " from nut to 12th fret on the D and High E strings. Another 12.5 to the bridge point where the string hits it + or - just a bit for the compensation factor for the diameter of the string and whether it's wound or open. The Low E string will need to be a little longer than the A string next to it. The D string is a little shorter than the A String..( this is the one that should be equal to the Nut to 12th fret distance. Then the G string is about the same length as the Low E. Then the B string is shorter than the G string. And the high E string is shorter than the B string next to it. But the High E string is again double the distance from nut to 12th fret.
Visually, this is a good place to start.
Try measuring on the D string from the nut to the bridge point of contact. Take half of that distance and compare to the disitance from the nut to the 12th fret. They should be about equal. High E string is about the same. Then the A and Low E should each progressively get a little longer. Do the same for the High E string. Measure and make nut to 12th fret and 12 fret to bridge contact point equal distances. Then B and G progressively get a bit longer than the one next to it.
Do that and see if those measurements are about correct and start from that point.
My Strat is the same way, except the distance from nut to 12th fret is a bit longer by 1/4 " . But the principle and proportion is the same.
Measure from nut to 12th fret... that's the key distance. Then 12th to bridge should be the same.
I hope this helps. Good Luck.