It reminds me of back in the day quite a while ago, my first guitar was a Fender Stratocaster, with $49 amplifier.
I ended up buying a Fender hot Rod deluxe, very happy sounded Really good with the Stratocaster, the overdrive channel was useless, but I did buy an overdrive pedal.
so I was getting Reasonably good tones at moderate gain, of course clean Crunch was great. but then I bought a Gibson SG, I couldn't seem to get a good tone out of the amplifier so I blamed it on the guitar. So I sold the guitar, bought another humbucker guitar, Same problem too dark to bassy, Got very mighty very quick. Had a hard time getting them to sparkle, it finally dawned on me that the amplifier was not good for humbucker's, I do just think they get along really well even awesome with single coils and not so well with humbucker's,
so I took the guitar to the guitar Center, ended up going home with a Mesa boogie Mark five, all problems solved every guitar sounded good, the EQ controls could adapt to every pickup. I couldn't wait to sell the fender. although I have to say I do miss the reverb tank I think that's what originally attracted me to the amplifier when I had the Stratocaster, excellent reverb.
so I actually think those pickups which are very reminiscent of 1958 PAF, but still hotter, very close to 9K resistance, will probably just not get along with that amplifier, I believe You can get a good tone, but you'll have to work extremely hard to get a great tone. once I got my Marshall JVM, every humbucker equipped guitar sounds awesome.
so I'm just thinking out loud brainstorming, I also have a helix which is really good, but it's very bass heavy bias, And easily has way too much gain on tap, I get great results by automatically dialing the bass control down to 1 or 2, Same thing gain set at 2 to start. then bring it up if it needs more.
I've actually started doing that on every amplifier I test, I roll the bass control down to zero, it's amazing how good the guitars sound with that EQ knob all the way to zero, Of course bringing back a little bass makes the tone even sweeter, but I was surprised how much bass remains in the All of the amplifier circuits.
so that might be one trick is to really dial way back on the bass perhaps.
You should be able to get some tremendous sounds from the helix, I put my Marshall amp side-by-side with the helix and dialed all the controls till I had identical tone Out of each amplifier it was amazing I could not tell which amplifier I was plugged into, Had my buddy clicking the AB switch.
And like I said all the knobs on the helix were considerably lower settings than the knobs on the Marshall.
This could be just the excuse you need to buy a PRS amplifier, seriously Sonzera 20? Sonzera 50